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硫胺素芽孢杆菌TYYJ-1的生物脱硫特性及基因组分析研究

Study on the biodesulfurization characteristics and genomic analysis of Aneurinibacillus aneurinilyticus TYYJ-1

  • 摘要:
    目的 生物脱硫是一种在常温下利用需氧、厌氧菌去除含硫化合物的绿色净化技术,具有脱硫效率高、所需设备简单、建设时间短、费用低、化学品消耗少等优势,但需解决目前生物脱硫工艺普遍存在的脱硫机理认识不足、无法快速确认脱硫菌最佳脱硫条件及脱硫菌株耐盐度低等问题。
    方法 从中国石油西南油气田公司某天然气净化厂污水处理池中分离了一株具有硫化物氧化能力的菌株TYYJ-1。通过16S rRNA基因对比分析,菌株TYYJ-1属于硫胺素芽孢杆菌(Aneurinibacillus aneurinilyticus)。对TYYJ-1的形貌和生长特性进行研究后,通过单因素实验和Box-Behnken响应面优化实验研究了其生物脱硫特性。采用PacBio RS Ⅱ 单分子实时测序和Illumina二代测序组合对TYYJ-1的全基因组进行测序,构建基因组完成图。
    结果 在培养温度为33 ℃、培养时间为45 h、初始pH为7.3的条件下,S2−脱除率最高,达到97.4%。菌株TYYJ-1耐盐性强,在Na2SO4质量浓度为25 g/L的条件下生长并发挥出稳定的脱硫效果。在对TYYJ-1进行基因组基本性质分析后,结合直系同源蛋白簇数据库(clusters of orthologous groups,COG)、京都基因与基因组百科全书(Kyoto encyclopedia of genes and genomes,KEGG)、基因本体论(gene ontology,GO)等分子生物学数据库对其功能基因进行注释,从基因层面对TYYJ-1脱硫机理、耐盐机理进行探究。结果表明,菌株TYYJ-1可通过sqr等代谢通路氧化硫化物获能,也可通过cysKmetY等基因将硫化物同化,合成其生长代谢所需的含硫氨基酸。同时,TYYJ-1表达TST蛋白可分解生物脱硫过程中产生的硫代硫酸盐。菌株TYYJ-1可表达trkH蛋白,并通过积累K+增强渗透压的耐受性,从而提升耐盐能力。
    结论 该菌株具有硫氧化能力强、耐盐度高、可脱除多种硫化物的特点,在生物脱硫领域具有广阔的应用潜力。

     

    Abstract:
    Objective Biodesulfurization is a green purification technology that utilizes aerobic and anaerobic bacteria to remove sulfur-containing compounds at ambient temperature. It has the advantages such as high desulfurization efficiency, simple equipment requirements, short construction time, low cost and less chemical consumption. However, key challenges remain to be addressed, including the insufficient understanding of desulfurization mechanisms, inability to rapidly ascertain the optimal operational conditions for desulfurizing microorganisms, and low salinity tolerance of desulfurization bacteria.
    Method A sulfide-oxidizing bacterial strain TYYJ-1 was isolated from the wastewater treatment pool of a natural gas purification plant of PetroChina Southwest Oil & Gasfield Company. Through the comparative analysis of 16S rRNA gene, the strain TYYJ-1 belongs to Aneurinibacillus aneurinilyticus. After investigating the morphology and growth characteristics of TYYJ-1, its biodesulfurization performance was systematically examined through single-factor experiments and Box-Behnken response surface optimization experiments. The whole-genome sequencing was performed using a combination of PacBio RS Ⅱ single molecule real-time sequencing and Illumina next-generation sequencing, and the genome completion map was constructed.
    Result When the culture temperature was 33 ℃, the culture time was 45 h and the initial pH was 7.3, the highest S2− oxidation rate reached 97.4%. The strain TYYJ-1 had strong salt tolerance, and grew under the condition of Na2SO4 mass concentration of 25 g/L and exerted a stable desulfurization effect. After analyzing the basic properties of the TYYJ-1 genome, the functional genes were annotated with molecular biology databases such as clusters of orthologous groups(COG), Kyoto encyclopedia of genes and genomes(KEGG), and gene ontology(GO), and the desulfurization mechanism and salt tolerance mechanism of TYYJ-1 were explored from the genetic level. The results showed that strain TYYJ-1 could oxidize sulfides through metabolic pathways such as sqr, and assimilate sulfides through genes such as cysK and metY to synthesize sulfur-containing amino acids required for its growth and metabolism. At the same time, TYYJ-1 expressed TST protein to decompose thiosulfate generated during biodesulfurization. The strain TYYJ-1 could express trkH protein and enhance osmotic pressure tolerance and salt tolerance by accumulating K+.
    Conclusion The strain has the characteristics of strong sulfur oxidation ability, high salinity resistance and removal of various sulfides, and has broad application potential in the field of biodesulfurization.

     

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